PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Plant Transcription Factor Database

v4.0

Previous version: v3.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcC053702.120

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

GeBP

Protein Properties

Length: 375aa MW: 41005.7 Da PI: 5.3806

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC053702.120	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	70.1	4.5e-22	52	150	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvk..ksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskk 94 +f+r+wse Dei +Lq l+d+++++ s d+ fy+ ++ + s +s+sql eK+r L+kKf+ +++ ++ +ps ++hd+ f+ls++ EcC053702.120 52 KFHRIWSEADEIRFLQCLLDCASSQRLSFPRDLRVFYRRFSaaSAASQPYSNSQLYEKLRGLRKKFRAVSSRlDRRALDPSRLSPHDRALFDLSER 147 799*********************99999***98722567889*******************667789************** PP DUF573 95 iWg 97 +W EcC053702.120 148 LWA 150 6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	2.6E-23	53	149	IPR007592	Protein of unknown function DUF573

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0016042	Biological Process	lipid catabolic process

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence Send to blast
MDSSSPTPPP PPPPPPPLEP PSKLPIKRKS PHPAASPDHP RRRDPAASPP SKFHRIWSEA 60 DEIRFLQCLL DCASSQRLSF PRDLRVFYRR FSAASAASQP YSNSQLYEKL RGLRKKFRAV 120 SSRLDRRALD PSRLSPHDRA LFDLSERLWA PKYASVSPFA AGNGTGNGNG NGGGGSGDVV 180 PDDGVGLVGV RVSFAPELHL GSKGRDEYDK GVICCAEEEE DDEEEAEEEW EEDYVADDVH 240 GNANGADAAR GDCRGGLKMK EVNVDCDFGG REDRVVISNE TTAGLGGGGV GGIGELVKRA 300 ALDVFDQSLE EVKAGFSQEP PLRCYCRCSC LSESLDSSFG AFKDRPRHLL DQRSAELDVF 360 GRRLRMIIEE VLTRK

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence Send to blast

MDSSSPTPPP PPPPPPPLEP PSKLPIKRKS PHPAASPDHP RRRDPAASPP SKFHRIWSEA  60
DEIRFLQCLL DCASSQRLSF PRDLRVFYRR FSAASAASQP YSNSQLYEKL RGLRKKFRAV  120
SSRLDRRALD PSRLSPHDRA LFDLSERLWA PKYASVSPFA AGNGTGNGNG NGGGGSGDVV  180
PDDGVGLVGV RVSFAPELHL GSKGRDEYDK GVICCAEEEE DDEEEAEEEW EEDYVADDVH  240
GNANGADAAR GDCRGGLKMK EVNVDCDFGG REDRVVISNE TTAGLGGGGV GGIGELVKRA  300
ALDVFDQSLE EVKAGFSQEP PLRCYCRCSC LSESLDSSFG AFKDRPRHLL DQRSAELDVF  360
GRRLRMIIEE VLTRK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010064840.1	0.0	PREDICTED: uncharacterized protein LOC104451995

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	4e-12	DNA-binding storekeeper protein-related transcriptional regulator