PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC053702.120
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GeBP
Protein Properties Length: 375aa    MW: 41005.7 Da    PI: 5.3806
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC053702.120genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57370.14.5e-2252150297
         DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvk..ksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskk 94 
                    +f+r+wse Dei +Lq l+d+++++  s   d+  fy+ ++  +  s  +s+sql eK+r L+kKf+  +++  ++  +ps  ++hd+  f+ls++
  EcC053702.120  52 KFHRIWSEADEIRFLQCLLDCASSQRLSFPRDLRVFYRRFSaaSAASQPYSNSQLYEKLRGLRKKFRAVSSRlDRRALDPSRLSPHDRALFDLSER 147
                    799***********************99999*******98722567889***********************667789****************** PP

         DUF573  95 iWg 97 
                    +W 
  EcC053702.120 148 LWA 150
                    **6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.6E-2353149IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016042Biological Processlipid catabolic process
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MDSSSPTPPP PPPPPPPLEP PSKLPIKRKS PHPAASPDHP RRRDPAASPP SKFHRIWSEA  60
DEIRFLQCLL DCASSQRLSF PRDLRVFYRR FSAASAASQP YSNSQLYEKL RGLRKKFRAV  120
SSRLDRRALD PSRLSPHDRA LFDLSERLWA PKYASVSPFA AGNGTGNGNG NGGGGSGDVV  180
PDDGVGLVGV RVSFAPELHL GSKGRDEYDK GVICCAEEEE DDEEEAEEEW EEDYVADDVH  240
GNANGADAAR GDCRGGLKMK EVNVDCDFGG REDRVVISNE TTAGLGGGGV GGIGELVKRA  300
ALDVFDQSLE EVKAGFSQEP PLRCYCRCSC LSESLDSSFG AFKDRPRHLL DQRSAELDVF  360
GRRLRMIIEE VLTRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010064840.10.0PREDICTED: uncharacterized protein LOC104451995
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.14e-12DNA-binding storekeeper protein-related transcriptional regulator