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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC053702.120 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | GeBP | ||||||||
Protein Properties | Length: 375aa MW: 41005.7 Da PI: 5.3806 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 70.1 | 4.5e-22 | 52 | 150 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvk..ksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskk 94 +f+r+wse Dei +Lq l+d+++++ s d+ fy+ ++ + s +s+sql eK+r L+kKf+ +++ ++ +ps ++hd+ f+ls++ EcC053702.120 52 KFHRIWSEADEIRFLQCLLDCASSQRLSFPRDLRVFYRRFSaaSAASQPYSNSQLYEKLRGLRKKFRAVSSRlDRRALDPSRLSPHDRALFDLSER 147 799***********************99999*******98722567889***********************667789****************** PP DUF573 95 iWg 97 +W EcC053702.120 148 LWA 150 **6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 2.6E-23 | 53 | 149 | IPR007592 | Protein of unknown function DUF573 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0016042 | Biological Process | lipid catabolic process |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence Send to blast |
MDSSSPTPPP PPPPPPPLEP PSKLPIKRKS PHPAASPDHP RRRDPAASPP SKFHRIWSEA 60 DEIRFLQCLL DCASSQRLSF PRDLRVFYRR FSAASAASQP YSNSQLYEKL RGLRKKFRAV 120 SSRLDRRALD PSRLSPHDRA LFDLSERLWA PKYASVSPFA AGNGTGNGNG NGGGGSGDVV 180 PDDGVGLVGV RVSFAPELHL GSKGRDEYDK GVICCAEEEE DDEEEAEEEW EEDYVADDVH 240 GNANGADAAR GDCRGGLKMK EVNVDCDFGG REDRVVISNE TTAGLGGGGV GGIGELVKRA 300 ALDVFDQSLE EVKAGFSQEP PLRCYCRCSC LSESLDSSFG AFKDRPRHLL DQRSAELDVF 360 GRRLRMIIEE VLTRK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010064840.1 | 0.0 | PREDICTED: uncharacterized protein LOC104451995 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 4e-12 | DNA-binding storekeeper protein-related transcriptional regulator |